LOR.fetch_lor_codes

LOR.fetch_lor_codes(update=False, pickle_it=False, data_dir=None, verbose=False)[source]

Fetch PRIDE/LOR codes from local backup.

Parameters

  • update (bool) – whether to check on update and proceed to update the package data, defaults to False

  • pickle_it (bool) – whether to replace the current package data with newly collected data, defaults to False

  • data_dir (str or None) – name of package data folder, defaults to None

  • verbose (bool) – whether to print relevant information in console as the function runs, defaults to False

Returns

LOR codes

Return type

dict

Example:

>>> from pyrcs.line_data import LOR

>>> lor = LOR()

>>> lor_codes_dat = lor.fetch_lor_codes()

>>> type(lor_codes_dat)
<class 'dict'>
>>> type(lor_codes_dat['LOR'])
<class 'dict'>
>>> print(list(lor_codes_dat['LOR'].keys()))
['CY', 'EA', 'GW', 'LN', 'MD', 'NW/NZ', 'SC', 'SO', 'SW', 'XR']

>>> type(lor_codes_dat['LOR']['CY'])
<class 'dict'>