LOR.fetch_lor_codes

LOR.fetch_lor_codes(update=False, pickle_it=False, data_dir=None, verbose=False)

Fetch PRIDE/LOR codes from local backup.

Parameters

• update (bool) – whether to do an update check (for the package data), defaults to False

• pickle_it (bool) – whether to save the data as a pickle file, defaults to False

• data_dir (str or None) – name of a folder where the pickle file is to be saved, defaults to None

• verbose (bool or int) – whether to print relevant information in console, defaults to False

Returns

LOR codes

Return type

dict

Example:

>>> from pyrcs.line_data import LOR

>>> lor = LOR()

>>> # lor_codes_dat = lor.fetch_lor_codes(update=True, verbose=True)
>>> lor_codes_dat = lor.fetch_lor_codes()

>>> type(lor_codes_dat)
dict

>>> l_codes = lor_codes_dat['LOR']

>>> type(l_codes)
dict
>>> list(l_codes.keys())
['CY', 'EA', 'GW', 'LN', 'MD', 'NW/NZ', 'SC', 'SO', 'SW', 'XR']

>>> cy_codes = l_codes['CY']

>>> type(cy_codes)
dict
>>> list(cy_codes.keys())
['CY', 'Notes', 'Last updated date']